51st meeting of the Nematologists of the German Society of Phytopathology (DPG), JKI, Braunschweig, Germany, March 8-9, (Link)
Hemanth Kumar Koniganahalli Gopal ,Etienne GJ Danchin & Sebastian Kiewnick. Potential of Meloidogyne enterolobii to adapt to new hosts. 15′ oral presentation
Marine Poullet, Gopal Koniganahalli H, Rancurel C, Sallaberry M, Lopez-Roques C, Lledo J, Kiewnick S, Danchin EGJ. High-quality genome assembly of the root-knot nematode Meloidogyne enterolobii. 15′ oral presentation
2022
Soph-IA summit: Springboard for Artificial Intelligence, 23-25 November, Sophia Antipolis Technology Park (Link)
Djampa Kozlowski, Stéphane Descombes, Silvia Bottini, Etienne GJ Danchin. NERD : A tool to predict proteins involved in nematode parastitism. 10′ oral presentation
Reads2Genpop : From sequence reads to genomes and populations, National Museum of Natural History, Paris, France 21-22 Sept 2022 (Link)
Ana Zotta Mota, Georgios D. Koutsovoulos, Etienne GJ Danchin. So close yet so far: scaffolding and phasing highly similar copies from a triploid hybrid. 15′ oral presentation
Karine Robbe-Sermesant, Arthur Péré, Corinne Rancurel, Christophe Klopp, Laetitia Perfus-Barbeoch, Daniel Esmenjaud, Cyril Van Ghelder, Marie Gislard, Céline Lopez-Roques, Carole Iampietro, Ulysse Portier, Etienne GJ Danchin. Telomere-to-telomere genome assembly of the phytoparasitic nematode and virus vector Xiphinema index. Poster presentation
Paola Porracciolo, Djampa Kozlowski, Etienne Danchin and Silvia Bottini. A novel method to identify and score clusters of motifs of protein sequences (CLUMPs) based on amino acids physicochemical properties. Poster presentation.
Martine Da Rocha, Arthur Péré, Etienne G.J. Danchin and Corinne Rancurel. BioInformatics and Genomics platform at Institut Sophia Agrobiotech. Poster presentation
Rencontres du pôle M2SUD – INRAE PACA – ‘AI & Machine Learning’ Le Tholonet, France, June 24 2022 (Link)
Etienne Danchin et Djampa Kozlowski. Utilisation de l’IA en santé des plantes pour l’étude des génomes de parasites et pathogènes. 30′ oral presentation
7th International Congress of Nematology, Juan les Pins, France, 1-6 May 2022 (Link).
Georgios D. Koutsovoulos, Evelin Despot-Slade, Martine Da Rocha, Claire Caravel, Pierre Abad, Nevenka Meštrović, Etienne G.J. Danchin. The strange chromosome ends of root-knot nematodes. 5′ oral presentation
Georgios Koutsovoulos, Corinne Rancurel, Laetitia Zurletto, Martine Da Rocha, Djampa K. Kozlowski, Benjamin Noël, Patrick Wincker, Etienne G.J. Danchin. Evolutionary and comparative genomics of tropical root-knot nematodes. 15′ oral presentation
Carole Belliardo, Adrien Deceneux, Corinne Rancurel, Marc Bailly-Bechet, Etienne G.J. Danchin. Metagenomics mining improves analysis of horizontal gene transfers involved in parasitic function in plant-parasitic nematodes. 15′ oral presentation
Hemanth Kumar Koniganahalli Gopal, Sebastian Kiewnick, Etienne G.J. Danchin. Host status of Crop plants to Meloidogyne enterolobii populations. 15′ oral presentation.
Nik Susič, Georgios D. Koutsovoulos, Cristian Riccio, Etienne G. J. Danchin, Mark L. Blaxter, David H. Lunt, Polona Strajnar, Saša Širca, Gregor Urek, Barbara Gerič Stare. High-quality genome assembly of an emerging root-knot nematode species, Meloidogyne luci. 15′ oral presentation
Laetitia Perfus-Barbeoch Zurletto, Rahim Hassanaly-Goulamhoussen, Christoph Grunau, Etienne G.J. Danchin, Bruno Favery, Philippe Castagnone, Pierre Abad. Epigenetic modifications in Meloidogyne incognita virulence to resistance gene Mi in tomato. 15′ oral presentation.
50th meeting of the Nematologists of the German Society of Phytopathology (DPG), online, March 9, 2022. (Link)
Hemanth Kumar Koniganahalli Gopal ,Etienne GJ Danchin & Sebastian Kiewnick. Host status evaluation of crop plants against Meloidogyne enterolobii isolates. 15′ oral presentation
2021
Environmental and Agronomical Genomics Symposium, Université de Tours, France October 27-29 (Link).
Georgios Koutsovoulos, Djampa K. L. Kozlowski, Marc Bailly-Bechet, Erika V. S. Albuquerque, Marie-Jeanne Arguel, Laurent Duret, Philippe Castagnone-Sereno, and Etienne G. J. Danchin. The root-knot nematode Meloidogyne incognita shows surprising adaptability despite clonal reproduction and low variation at the genome level. 20′ Oral presentation
Georgios Koutsovoulos, Laetitia Perfus-Barbeoch , Romain Blanc-Mathieu, Benjamin Noel , Jean-Marc Aury, Philippe Castagnone-Sereno, Pierre Abad , Patrick Wincker and Danchin Etienne. What did 3 generations of genome sequencing technologies allow to learn about the biology and evolution of root-knot nematodes? Poster
JOBIM 2021 (Virtual Edition), Institut Pasteur Paris France July 6-9 2021 (Link).
Georgios D. Koutsovoulos, Solene Granjeon Noriot, Marc Bailly-Bechet, Etienne G. J. Danchin and Corinne Rancurel. AvP: a software package for automatic phylogenetic detection of candidate horizontal gene transfers. 15′ Oral Presentation
Carole Belliardo, Mathilde Clement, Justine Lipuma, Georgios D Koutsovoulos, Corinne Rancurel, Marc Bailly-Bechet and Etienne GJ Danchin. Improving the quality of public metagenomic data to study soil microorganisms. Poster
Mélanie Masson, Domnique Colinet, Etienne GJ Danchin. Study of de novo gene birth in the genomes of plant-parasitic nematodes of the Meloidogyne genus. Poster
Mathilde BOYER, Georgios KOUTSOVOULOS, Arthur PERE, Etienne G. J. DANCHIN and Dominique COLINET. Detection of horizontal gene transfers of non-metazoan origin in the whitefly Bemisia tabaci. Poster
Martine DA ROCHA, Arthur PÉRÉ, Etienne DANCHIN and Corinne RANCUREL. BioInformatics and Genomics platform at Institut Sophia Agrobiotech. Poster
Arthur PÉRÉ, Frédérique HILLIOU, Etienne G.J. DANCHIN, Martine DA ROCHA and Corinne RANCUREL. PADLE – Profiling Analysis of DifferentiaL Expression: a tool and environment designed to analyse complex RNA-seq gene expression data. Poster
ESN’s Virtual Nematology Conference May 26-28 2021 (Link)
Carole Belliardo – INRAE (FR). Mining soil metagenomes improves analysis of horizontal gene transfers involved in parasitic functions of root-knot nematodes. 15′ Oral Presentation
Hemanth Kumar Koniganahalli Gopal – Julius Kühn Institut (DE). AEGONE: Adaptability, Origin and Genome Evolution of an emerging plant-devastating nematode. 15′ Oral Presentation
Rahim Hassanaly – Institut Sophia Agrobiotech (FR). Chromatin landscape dynamics in development of the plant parasitic nematode Meloidogyne incognita. 15′ Oral Presentation
Caroline Bournaud – University of Claude Bernard Lyon (FR). Genome expression dynamics reveals parasitism regulatory landscape of the root knot nematode Meloidogyne incognita and a promoter motif associated with effector genes. 15′ Oral Presentation
Thi Ngan Phan – PHIM Plant Health Institute, Univ Montpellier, IRD, CIRAD, INRAE, Institut Agro (FR). Evolutionary traits in the facultative meiotic parthenogenetic nematode Meloidogyne graminicola. 15′ Oral Presentation
Journées de l’Ecole Doctorale de Nice May 25-26 2021
Carole Belliardo, Adrien Deceneux, Corinne Rancurel, Georgios D. Koutsovoulos, Marc Bailly Bechet, Etienne G.J. Danchin. Mining soil metagenomes improves analysis of horizontal gene transfers involved in parasitic functions of root knot nematodes. Poster presentation
2020
Evolutionary Biology of Caenorhabditis and Other Nematodes, Virtual Edition, June 24-25 2020 (Link)
Carole Belliardo, Adrien Deceneux, Corinne Rancurel, Marc Bailly-Bechet, Etienne G.J. Danchin. Metagenomics mining improves analysis of horizontal gene transfers involved in parasitic function in root-knot nematodes. Poster
2019
23rd Evolutionary Biology Meeting in Marseilles, September 24-27, 2019 -Marseilles, France (Link)
Etienne G.J. Danchin, Romain Blanc-Mathieu, Georgios D. Koutsovoulos, Laetitia Perfus-Barbeoch, Pierre Abad, Philippe Castagnone-Sereno, Marc Bailly-Bechet, Martine Da Rocha, Djampa Kozlowski, Corinne Rancurel, Erika Sallet, Jérôme Gouzy, Jean-Marc Aury, Patrick Wincker et al. Parasitic success without sexual reproduction: what more than 10 years of root-knot nematode genomics revealed? 20′ Oral Presentation
Georgios D. Koutsovoulos, Eder Marques, Marie-Jeanne Arguel, Laurent Duret, Andressa C.Z. Machado, Regina M.D.G. Carneiro, Djampa K. Kozlowski, Philippe Castagnone-Sereno, Erika V.S. Albuquerque, Etienne G.J. Danchin. Meloidogyne incognita shows surprising parallel adaptations to different ranges of host plants despite clonal reproduction and low variation at the genome level. 20′ Oral Presentation
A. Deceneux, G. Koutsovoulos, C. Rancurel, M. Bailly-Bechet, E. Danchin. Mining metagenomics to uncover horizontal transfers in Meloidogyne incognita. Poster
The Mobile DNA Conference: 25 Years of Discussion and Research, June 23-28, Palm Springs, California, USA (Link).
Transposable Elements activity and role in Meloidogyne incognita genome dynamic and adaptability. Djampa Kozlowski, Marc Bailly-Bechet, Etienne Danchin. 15′ Oral Presentation
International Plant & Animal Genome XXVII / January 12-16, 2019 – San Diego, CA, USA (Link)
Zotta Mota A, Arraes F. B.M., Albuquerque E.S.V, Petitot A-S, Fernandez D., Guimaraes P.M., Brasileiro A.C.M, Grossi de Sa F., Danchin E.G.J. Identification of Evolutionarily Conserved Genes Responsive to Root-Knot Nematodes from Root Transcriptome of Four Plant Species. 20’Oral Presentation
Zotta Mota A, Oliveira T.N., Vinson C.C., Williams T.C.R., Costa M.C.C., Arujo A.C., Danchin E.G.J., Grossi de Sa F., Guimaraes P.M., Brasileiro A.C.M. Characterization of Dehydrins in the Fabaceae Family Reveals a Wild Arachis Novel Gene Antagonist in Its Response to Abiotic and Biotic Stresses. Poster
Zotta Mota A, Danchin E.G.J., Brasileiro A.C.M., Grossi de Sa F., Guimaraes P.M. The Whole is Not the Sum of its Parts: Simultaneous Biotic and Abiotic Stresses in Arachis stenosperma. Poster
Guimaraes P.M., Grynberg P., Antonio Souza Jr. D., Freitas L., Arujo A.C., Brasileiro A.C.M., Miller R.N.G, Danchin E.G.J. Comparative Genomics to Identify Novel Targets for RNA Interference-Mediated Resistance Against Root-Knot Nematodes Poster
2018
International Symposium on Environmental and Agronomical Genomics. Paris, France. November 5-7, 2018 (Link)
Rancurel C, Granjeon-Noriot S, Danchin EGJ, Koutsovoulos GD. AvP– Alienness vs Predictor: Fast and robust detection of horizontal gene transfers across the tree of life. Poster
33rd International Symposium of the European Society of Nematologists. Ghent, Belgium. September 9-13 2018 (Link)
Blanc-Mathieu R., Perfus-Babeoch L., Aury JM., Da Rocha M., Gouzy J., Sallet E., Martin-Jimenez C., Bailly-Bechet M., Castagnone-Sereno P., Flot JF., Kozlowski DK., Cazareth J., Couloux A., Da Silva C., Guy J., Kim-Jo YJ, Rancurel C., Schiex T., Abad P., Wincker P., Danchin E.G.J. Parasitic success without sex in root-knot nematodes: allopolyploid genomes might help them adapt. 15′ oral presentation
2nd Joint Congress on Evolutionary Biology – Montpellier, August 19-22, 2018 (Link)
Blanc-Mathieu R., Perfus-Babeoch L., Aury JM., Da Rocha M., Gouzy J., Sallet E., Martin-Jimenez C., Bailly-Bechet M., Castagnone-Sereno P., Flot JF., Kozlowski DK., Cazareth J., Couloux A., Da Silva C., Guy J., Kim-Jo YJ, Rancurel C., Schiex T., Abad P., Wincker P., Danchin E.G.J.Parasitic success without sex in root-knot nematodes: allopolyploid genomes might help them adapt. Poster
Kozlowski D, Da Rocha M, Abad P, Castagnone-Sereno P, Mirouze M, Perfus-Barbeoch L, Bailly-Bechet M, Danchin EGJ. Do transposable elements provide genomic plasticity in the absence of sex in devastating plant-parasitic nematodes ? Poster
Poullet M, Koutsovoulos GD, El Ashry A, Sallet E, Da Rocha M, Perfus-Barbeoch L, K. Kozlowski D, Danchin EGJ, Kiewnick S. Exploring the genomic structure of the root-knot nematode Meloidogyne enterolobii. Poster
19émes Journées Ouvertes Biologie, Informatique et Marthématiques (JOBIM 2018). Marseille France, July 3-6, 2018. (Link).
Rancurel C, Granjeon-Noriot S, Danchin EGJ, Koutsovoulos GD. AvP– Alienness vs Predictor: Fast and robust detection of horizontal gene transfers across the tree of life. Poster
Da Rocha M, Danchin EGJ, Rancurel C. BioInformaticsand Genomicsplatform at Institut Sophia Agrobiotech. Poster
Bailly-Bechet M, Belliardo C, DanchinEGJ. An -omics search for viruses infecting the phytoparasitic nematode M. incognita. Poster
5th Agreenskills annual Meeting, Edinburgh, UK June 10-14 (Link).
Koutsovoulos GD, Castagnone-Sereno P, Danchin EGJ. Genome heterozygosity and plasticity in devastating parthenogenetic plant pests. Poster
2017
21st Evolutionary Biology Meeting. Marseille, France (Link).
Zotta Mota A.P., Messenberg Guimaraes P., Miranda Brasileiro A.C., Grossi de Sá M.F., Danchin E.G.J. Identification of evolutionarily conserved genes responsive to nematode infection in four plant species. Poster.
CNET 2017: 20th annual meeting organized by the French research community working on transposable elements. Nice, France July 10-12, 2017
Da Rocha M, Abad P, Bailly-Bechet M, Castagnone-Sereno P, Mirouze M, Perfus-Barbeoch P, Danchin EGJ. Do transposable elements provide genomic plasticity in the absence of sex in devastating plant-parasitic nematodes? Poster
18émes Journées Ouvertes Biologie, Informatique et Marthématiques (JOBIM 2017). Lille France, July 3-6, 2017.
Belliardo C, Rancurel C, Danchin E and Bailly-Bechet M. Horizontal gene transfer from viruses in the genomes of plant-parasitic nematodes. Poster.
4th Agreenskills annual Meeting, Pairs, France, Februrary 13-16 (Link).
Koutsovoulos GD, Castagnone-Sereno P, Danchin EGJ. Genome heterozygosity and plasticity in devastating parthenogenetic plant pests. Poster
2016
20th Evolutionary Biology Meeting. Marseille, France. September 20-23 2016. (Link).
Blanc-Mathieu R, Perfus-Babeoch L, Da Rocha M, Gouzy J, Sallet E, Castagnone-Sereno P, Aury JM, Couloux A, Flot JF, Da Silva C, Schiex T, Abad P, Danchin E.G.J. Polyploid hybrid genomes of devastating plant pests allow plasticity without sex and meiosis. 20′ oral presentation.
32nd International Symposium of the European Society of Nematologists. August 28-September 1 2016, Braga, Portugal (Link)
Blanc-Mathieu R, Perfus-Babeoch L, Da Rocha M, Gouzy J, Sallet E, Castagnone-Sereno P, Aury JM, Couloux A, Flot JF, Da Silva C, Schiex T, Abad P, Danchin E.G.J. Polyploid hybrid genomes of devastating plant pests allow plasticity without sex and meiosis. 20′ oral presentation.
2015
Mathematical and Computational Evolutionary Biology (MCEB) Meeting. Porquerolles, France. June 21-25 2015.
Blanc-Mathieu R, Perfus-Babeoch L, Da Rocha M, Gouzy J, Sallet E, Castagnone-Sereno P, Aury JM, Couloux A, Flot JF, Da Silva C, Schiex T, Abad P, Danchin E.G.J. Evolutionary successful and asexual: the paradox of the root-knot nematodes? 30′ oral presentation.
1st French-Brazilian Workshop of Science Without Borders program at Embrapa Genetic Ressources and Biotechnology. Brasilia, Brazil. March 24 2015.
E.G.J. Danchin. Mining the genomes of root-knot nematodes to identify new and safer targets for nematode control. 30′ oral presentation.
2014
18th Evolutionary Biology Meeting. Marseille, France, September 16-19, 2014. (Link)
David McK Bird, John T. Jones, Charles H. Opperman, Taisei Kikuchi, Etienne G.J. Danchin. Signatures of (convergent) adaptation to plant parasitism in nematode genomes. 5′ oral presentation + poster
13th European Conference on Computational Biology (ECCB), September 7-10 2014, Strasbourg, France. (Link)
Corinne Rancurel, Martine Da Rocha and Etienne G J Danchin. Alienness : Rapid detection of horizontal gene transfers in metazoan genomes. poster
6th International Congress of Nematology. Cape Town, South Africa, May 4-9, 2014. (Link)
E.G.J. Danchin, M-J. Arguel, A. Campan-Fournier, L. Perfus-Barbeoch, M. Magliano, M-N. Rosso, M. Da Rocha, P. Abad. Root-knot nematodes pan-genomics reveals novel target genes for safer and more specific control methods. 15′ oral presentation.
2013
Meeting of project leaders of the “Plant Health and Environment” (SPE) INRA department. Paris, France, October 2-3, 2013. (Link)
EGJ Danchin, A. Couloux, L. Perfus-Barbeoch. Comparative analysis of mitochondrial genomes of root-knot nematodes. 10′ oral presentation.
17th Evolutionary Biology Meeting. Marseille, France, September 17-20, 2013. (Link)
EGJ. Danchin, L. Perfus-Barbeoch, C. Da Silva, J-F. Flot, M. Da Rocha, L. Massardier, N. Nottet, P. Wincker, P. Abad, P. Castagnone-Sereno. Genomic consequences of the absence of meiosis and sexual reproduction in root-knot nematodes (Meloidogyne spp.). 20′ oral presentation.
Jacques Monod Conference on “Recent advances on the evolution of sex and genetic systems”. May 22-26 2013, Roscoff, France (Link).
EGJ. Danchin, L. Perfus-Barbeoch, C. Da Silva, J-F. Flot, M. Da Rocha, L. Massardier, N. Nottet, P. Wincker, P. Abad, P. Castagnone-Sereno Genomic consequences of the absence of meiosis and sexual reproduction in root-knot nematodes (Meloidogyne spp.). Poster.
2012
31st International Symposium of the European Society of Nematologists. September 23-27 2012, Adana, Turkey (Link).
E.G.J. Danchin, A. Campan-Fournier, L. Perfus-Barbeoch, M-J. Arguel, M. Da Rocha, M-N. Rosso, P. Abad. Identifying specific parasitism genes in root-knot nematodes by genome mining. Invited Talk, 20′ oral presentation (programme).
2012 Plant Genomics Colloquium (Genoplante, Link). April 3-5 2012, Pont royal en Provence, Mallemort, France.
Marie-Jeanne Arguel, Amandine Campan-Fournier, Laetitia Perfus-Barbeoch, Etienne G.J. Danchin, Marie-Noëlle Rosso, Corinne Da Silva, Karine Labadie, Nathalie Marteu, François Artiguenave, Pierre Abad. Identification of new genes as targets for the development of specific strategies against plant-parasitic nematodes. Poster
Evolution of Caenorhabditis and Other Nematodes (link), Cold Spring Harbor Laboratory, New York, USA, April 3-6 2012.
Etienne G.J. Danchin, Amandine Campan-Fournier, Martine Da Rocha, Eric Wajnberg, Julien Paganini, Philippe Gouret, Pierre Pontarotti, Pierre Abad. Contribution of lateral gene transfers to the biology and genomes of plant-parasitic nematodes. 15′ oral presentation.
William B. Rutter, Tarek Hewezi, Sahar Abubuckar, Tom R. Maier, Guozhong Huang, Etienne G.J. Danchin, Makedonka Mitreva, Richard S. Hussey, Thomas J. Baum. Mining Novel Effector Proteins from the Esophageal Gland Cells of Meloidogyne incognita. 15′ oral presentation.
Laetitia Perfus-Barbeoch, Etienne G.J. Danchin, Vivien Deshaies, Philippe Castagnone-Sereno, Pierre Abad. Comparative analysis of root-knot nematode mitochondrial genomes. Poster
2011
IV th Effecome Meeting, Lauret, France, September 28-30, 2011.
Etienne G.J. Danchin. Mining the genomes of root-knot nematodes to identify candidate parasitism genes. 20′ oral presentation.
Rencontres de Nématologie, Centre INRA de Tours, Nouzilly, France, June 28-29, 2011.
Etienne G.J. Danchin. Multiple lateral gene transfers and duplications have catalyzed the emergence of plant-parasitism in nematodes. 20′ oral presentation.
12émes Journées Ouvertes Biologie, Informatique et Marthématiques (JOBIM 2011). Paris, France, June 28- July 1, 2011.
Campan-Fournier A, Perfus-Barbeoch L, Rosso MN, Arguel MJ, Da Silva C, Vens C, Marteu N, Labadie K, ArtiguenaveF, Abad P and Danchin E.G.J. Identification of Putative Parasitism Genes in Plant-Parasitic Nematodes: in silico Screening of Whole Genomes and Transcriptomes. Link
63rd International Symposium on Crop Protection / Exploiting genomics to understand plant-nematode interactions, COST 872 Fifth Annual Meeting. Ghent, Belgium, May 24-25 2011.
Danchin E.G.J., Campan‐Fournier A., Perfus-Barbeoch L., Rosso M‐N., Arguel M.J., Da Silva C., Vens C., Gouzy J., Da Rocha M., Magliano M., Marteu N., Labadie K., Atiguenave F. & Abad P.. Identification of putative parasitism genes from whole genomes and transcriptomes of plant‐parasitic nematodes. 20′ Oral Presentation. Link
Arguel M.J., Campan-Fournier A., Perfus-Barbeoch L., Danchin E.G.J., Rosso M.N., Da Silva C., Labadie K., Marteu N., Artiguenave F., Abad P. Identification of Plant-Parasitism Genes in Nematodes, In silico Screening and In vivo Validation in Meloidogynei ncognita.Best Poster Award Link
2010
14th Evolutionary Biology Meeting. Marseille, France, September 21-24, 2010.
Etienne G.J. Danchin, Jérôme Gouzy, Philippe Castagnone-Sereno, Thomas Guillemaud, Laetitia Perfus-Barbeoch, Patrick Wincker, Pierre Abad. Genomic perspectives on the evolution and success of plant-parasitism in root-knot nematodes. Poster + 5′ oral presentation. Link
Evolutionary Biology of Caenorhabditis and Other Nematodes (Link), Wellcome Trust Conference Centre, Hinxton, Cambridge, UK. June 5-8 2010.
Etienne G.J. Danchin. Multiple lateral gene transfers followed by duplications have shaped the cell-wall degrading ability of plant-parasitic nematodes. 20′ Oral Presentation.
Exploiting genomics to understand plant-nematode interactions, COST 872 Fourth Annual Meeting. Lisbon, Portugal, May 24-27 2010.
Vieira P., Danchin E.G.J., Neveu C., Crozat C., Jaubert S., Hussey R.S., Engler G., Abad, P., Castagnone-Sereno P., Rosso M.N. & de Almeida-Engler J. In planta localization of plant-parasitic nematode secreted proteins reveals the apoplasm as an important recipient compartment. 20′ Oral Presentation.
Etienne G.J. Danchin, Laetitia Perfus-Barbeoch, Marie-Noëlle Rosso, Philippe Castagnone-Sereno, Pierre Abad. Genomic perspectives on the evolution and success of parasitism in root-knot Nematodes. Poster
International SPIT (Secreted Proteins In Tylenchida) meeting, Univeristy of Georgia, Athens, USA. May 17-19 2010.
Etienne G.J. Danchin. Horizontal gene transfers and duplications have shaped the plant cell wall-degrading arsenal of nematodes. 30′ Oral Presentation.
2010 Plant Genomics Seminar (Genoplante). March 29-31 2010, Pont royal en Provence, Mallemort, France.
Perfus-Barbeoch L;, Danchin E.G.J., Rosso M.N., Campan A., Gouzy J., Artiguenave F., Jaouannet M., Magliano M., Wincker P., Abad P.. NEMATARGETS: Identification of new genes as targets for the development of specific strategies against plant-parasitic nematodes. Poster presentation.
2009
13th Evolutionary Biology Meeting. Marseille, France, September 22-25, 2009.
Etienne G.J. Danchin, Jérôme Gouzy, Philippe Castagnone-Sereno, Thomas Guillemaud, Laetitia Perfus-Barbeoch, Patrick Wincker, Pierre Abad. Origin and genomic consequences of loss of sexuality in plant-parasitic nematodes of the Meloidogyne genus. Poster presentation. Link
Exploiting genomics to understand plant-nematode interactions, COST 872 Third Annual Meeting. Toledo, Spain, May 25-28 2009.
Etienne G.J. Danchin, P. Castagnone-Sereno, J. Gouzy, T. Guillemaud, L. Perfus-Barbeoch, P. Wincker & P. Abad. Singularities in the genome of Meloidogyne incognita and their correlation with plant-parasitism. 20′ Oral presentation.
International Conference on Polyploidy, Hybridization and Biodiversity, Saint Malo, France, May 17-20, 2009.
Etienne G.J. Danchin, Jérôme Gouzy, Philippe Castagnone-Sereno, Thomas Guillemaud, Laetitia Perfus-Barbeoch, Patrick Wincker, Pierre Abad. Origin and genomic consequences of loss of sexuality in plant-parasitic nematodes of the Meloidogyne genus. Poster presentation.
Rencontres de Nématologie, Centre INRA de Tours, France, January 21-22, 2009.
Etienne G.J. Danchin. Evolutionary perspectives on the Meloidogyne incognita genome. 20′ oral presentation.
2008
12th Evolutionary Biology Meeting. Marseille, France, September 22-25, 2008.
Etienne G.J. Danchin. Plant Parasitism in Metazoans: Insights from the Meloidogyne incognita Nematode Genome. 20′ oral presentation + Poster Link
Etienne G.J. Danchin. Plant Parasitism in Metazoans: Insights from the Meloidogyne incognita Nematode Genome. 20′ oral presentation. Link
Exploiting genomics to understand plant-nematode interactions, COST 872 Second Annual Meeting. Postojna, Slovenia, May 26-29 2008.
Etienne G.J. Danchin. Annotation and comparative analysis of Carbohydrate-Active enZymes (CAZymes) in Meloidogyne incognita. 20′ oral presentation. Link
2007
The First International Fungal / Plant Cell Wall Meeting: Cell Wall Polysaccharides of Fungi and Plants. Biarritz, France, 10-14 March 2007. FEMS Young Scientist Grant Award
Etienne G.J. Danchin. Comparative and Evolutionary Analysis of Fungal repertoires of Carbohydrate-Active enZymes (CAZymes). Link. 20′ oral presentation.
2006
10th Evolutionary Biology Meeting. Marseille, September 20-22, 2006.
Etienne G.J. Danchin, Pedro M. Coutinho, Corinne Rancurel, Bernard Henrissat. Annotation, comparative and evolutionary analysis of fungal Carbohydrate Active enZymes (CAZymes). Poster + 5′ presentation. Link.
IXth International Fungal Biology Conference & 16th New Phytologist Symposium. Impact of genomics on fungal biology. Nancy, France, 19-20 September 2006.
Etienne G.J. Danchin, Pedro M. Coutinho, Corinne Rancurel, Bernard Henrissat. Evolutionary and Comparative Fungal CAZomics. Poster. Link.
14th International Conference on Intelligent Systems for Molecular Biology (ISMB’ 06) August 6 – 10, 2006. Fortaleza, Cearà, Brazil. ISCB Grant Awarded
Etienne G.J. Danchin, Pedro M. Coutinho, Corinne Rancurel, Bernard Henrissat. Annotation, comparative and evolutionary analysis of fungal Carbohydrate Active enZymes (CAZymes). Poster. Link.
2005
9th Evolutionary Biology Meeting. Marseille, September 21-23, 2005.
Gouret P, Vitiello V, Balandraud N, Gilles A, Pontarotti P, Danchin E.G.J. FIGENIX: A platform for automatic phylogenomic annotation. 5’ Oral presentation.
Etienne G.J. Danchin, Pierre Pontarotti. Losses of universally conserved genes in mammals and vertebrates. Poster.
25th European Workshop for Rheumatology Research, Glasgow, UK, 24-27 February 2005.
N Balandraud, P Gouret, E G.J. Danchin, M Blanc, D Zinn, P Pontarotti. A complete phylogenetic analysis coupling expression data from EST databases. An example with a family of genes: the peptidyl arginine deiminase genes. Poster presentation, Abstract published in: Arthritis Research & Therapy 2005, 7(Suppl 1):P34 (17 February 2005). Link
2004
8th Evolutionary Biology Meeting. Marseille, September 22-24, 2004.
Etienne G.J. Danchin, Verane Vitiello, Alexandre Vienne, Olivier Richard, Philippe Gouret, Michael F. McDermott, Pierre Pontarotti. Co-option and the emergence of the Major Histocompatibility Complex. 20′ Oral presentation. Abstract, Presentation.
Etienne G.J. Danchin, Pierre Pontarotti. Losses of universally conserved genes in our genome. Poster + 5′ oral presentation. Abstract, Poster.
Philippe Gouret, Etienne G.J. Danchin, and Pierre Pontarotti. A software platform for fully automated genomic annotation. Poster + 5′ oral presentation. Abstract, Poster.
N. Balandraud, P. Gouret, E.G.J. Danchin, P. Pontarotti. Towards a complete phylogenetic analysis to decipher functions of genes implicated in Human disorders ; through the example of peptidyl arginine deiminase genes (PADIs). Poster, Abstract.
12th International conference on Intelligent Systems for Molecular Biology (ISMB) in conjunction with the 3rd European Conference on Computational Biology ECCB.August 1-4, Glasgow, Scotland. INFOBIOGEN Grant Awarded.
Etienne G.J. Danchin, Pierre Pontarotti. Losses of Universally Conserved Genes in Our Genome. Poster. Link
2003
2nd European Conference on Computational Biology (ECCB) in conjunction with JOBIM, September 27-30, Paris, France. Link.
Etienne G.J. Danchin and Pierre Pontarotti. Back to the pre-genomic era. ECCB 2003 (European Conference on Computational Biology)
7th evolutionnary Biology Meering (Marseille Palais Longchamp), June 25-27, Marseille, France.
Etienne G.J. Danchin and Pierre Pontarotti. “Back to the pre-genomic era” Poster + 20″ oral presentation.
2002
First European Conference on Computational Biology (ECCB) October 6-9 2002 Saarbrücken, Germany. BioSapiens Network of Excellence Grant.
Danchin, Etienne G. J.; Abi-Rached, Laurent; Gilles, André; Pontarotti, Pierre. A conserved genomic region between vertebrates and insects. Link
2nd Journées Ouvertes Biologie Informatique Mathématiques (JOBIM) June 10-12, Saint-Malo, France.
Danchin E.G.J., Abi Rached L., Gilles A., Pontarotti P. Evolution des génomes de métazoaires : Metazoan genome evolution. Link
6th Evolutionary Biology Meeting in Marseilles, 21 Juin, Marseille, France.
Etienne G.J.Danchin, Pierre Pontarotti. 2002, Marseille, 21 Juin. Conserved synteny across bilaterian. Présentation orale 20′ ; résumé dans le recueil des actes.
2001
Colloque cartographie comparée, 2001, Lyon (Campus de la Doua) 03-04 Dec, France.
Danchin E., Abi Rached L., Gilles A., Pontarotti P. Metazoan Phylogenomics : search for Human / Drosophila conserved syntenies. Présentation orale 20″, ; résumé dans le recueil des actes.
5th Evolutionary Biology Meeting in Marseilles, 2001, 27-28 Juin, Marseille, France.
Danchin E., Abi Rached L., Gilles A., Pontarotti P. Large scale comparison of metazoan genomes: search for Human / Drosophila conserved syntenies by bioinformatics analysis. Poster et résumé dans le recueil des actes.
2000
1st Journées Ouvertes Biologie, Informatique, et Mathématiques (JOBIM), 2000, May 3-5, Montpellier, France.
Danchin E, Pontarotti P. Clonage du gène Ikaros chez l’Amphioxus. Présentation orale 5″ et Poster; résumé dans le recueil des actes.
Etienne GJ Danchin 